Author: Suzanne Paley
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EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism
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EcoCyc: Encyclopedia of Escherichia coli genes and metabolism
The encyclopedia of Escherichia coli genes and metabolism (EcoCyc) is a database that combines information about the genome and the intermediary metabolism of E.coli .
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A Collaborative Environment for Authoring Large Knowledge Bases
Collaborative knowledge base (KB) authoring environments are critical for the construction of high-performance KBs. In this paper, we present an environment that satisfies many of these goals.
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EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism
The Encyclopedia of E. coli Genes and Metabolism (EcoCyc) is a database that combines information about the genome and the intermediary metabolism of E. coli.
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EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism
The Encyclopedia of Genes and Metabolism (EcoCyc) is a database that combines information about the genome and the intermediary metabolism of Escherichia coli.
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A Generic Knowledge-Base Browser and Editor
The GKB Editor is a generic editor and browser of knowledge bases (KBs) and ontologies – generic in the sense that it is portable across several frame knowledge representation systems (FRSs).
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Integrated Access to Metabolic and Genomic Data
We describe the design and implementation of visual presentations that closely mimic those found in the biology literature, and employ a frame knowledge representation system (FRS) called HyperTHEO to manage the EcoCyc knowledge base.
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Adapting EcoCyc for Use on the World Wide Web
We have developed a Web server tool, written in Common Lisp, that allows existing graphical user interface applications written using the Common Lisp Interface Manager (CLIM) to hook easily into the WWW.
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EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism
The EcoCyc graphical user interface allows scientists to query and explore the EcoCyc database using visualization tools such as genomic-map browsers and automatic layouts of metabolic pathways.
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HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae
We present a methodology for predicting the metabolic pathways of an organism from its genomic sequence.
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Adapting CLIM Applications for Use on the World Wide Web
We have developed a Web server tool, written in Common Lisp, that allows any existing graphical user interface application written using the Common Lisp Interface Manager (CLIM) to hook easily into the WWW.
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Knowledge Representation in the Large
We describe the design and implementation of a storage subsystem that submerges a database management system (DBMS) within a knowledge representation system.