Artificial intelligence publications
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Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
Pathway Tools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB).
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Learning to Ask the Right Questions
Asking questions can clarify concepts, test hypotheses, add missing information, or provide additional knowledge to facilitate learning. The last item motivates the work described in this paper.
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A World Wider than the Web: End User Programming Across Multiple Domains
This chapter presents Integrated Task Learning (ITL), an approach for learning procedures across domains using end-user programming (EUP).
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Using Data Mining Findings to Aid Searching for Better Cognitive Models
We propose a hybrid approach in which we leverage findings from our previous educational data mining work to aid the search for a better cognitive model and thus, improve the…
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Bounded Verification of Adaptive Flight Control Systems
We formally verify a direct model reference adaptive control (MRAC) method that is used to enable flight control in adverse conditions.
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A Categorization of KR&R Methods for Requirement Analysis of a Query Answering Knowledge Base
Our long-term goal is to build a query answering system that can answer questions on a wide variety of topics and explain the answers.
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Gibbs Sampling in Open-Universe Stochastic Languages
This paper goes some way to remedying this deficit by introducing, and proving correct, a generalization of Gibbs sampling to partial worlds with possibly varying model structure.
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An advanced web query interface for biological databases
We present a web interface for building precise queries for biological DBs that can construct much more precise queries than most web-based query forms, yet that is user friendly enough…
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An Advanced Web Query Interface for Biological Databases
We present a web interface for building precise queries for biological DBs that can construct much more precise queries than most web-based query forms, yet that is user friendly enough…
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Goal-directed Metacontrol for Integrated Procedure Learning
We describe a metalevel framework for coordinating the activities of a community of learners to create an integrated learning system. The metalevel framework is organized around learning goals, which are…
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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
New developments include atom mappings in reactions, a new representation of glycan degradation pathways, improved compound structure display, better coverage of enzyme kinetic data, enhancements of the Web Groups functionality...
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Language Analytics for Assessing Brain Health: Cognitive Impairment, Depression and Pre-Symptomatic Alzheimers Disease
We present data demonstrating how brain health may be assessed by applying data-mining and text analytics to patient language.